Ontology description
| (rdf:type owl:Ontology ) |
|---|
Classes
| tio:AffyProbeset (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | affy_probeset |
| rdfs:label | Affymetrix probeset |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Probe |
| tio:Analysis (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Analysis |
| rdfs:subClassOf | tio:Category |
| tio:Anatomy (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Anatomy |
| rdfs:subClassOf | tio:Category |
| tio:AssemblyInsdc (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | assembly_insdc |
| rdfs:label | Assembly INSDC |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Genome |
| tio:AssemblyRefseq (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | assembly_refseq |
| rdfs:label | Assembly RefSeq |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Genome |
| tio:Atc (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | atc |
| rdfs:label | ATC classification |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Drug |
| tio:Bioproject (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | bioproject |
| rdfs:label | BioProject |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Project |
| tio:BioprojectUmbrella (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | bioproject_umbrella |
| rdfs:label | BioProject umbrella |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Project |
| tio:Biosample (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | biosample |
| rdfs:label | BioSample |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Sample |
| tio:Category (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Category |
| tio:Ccds (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | ccds |
| rdfs:label | Consensus CDS |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:CellLine (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Cell line |
| rdfs:subClassOf | tio:Category |
| tio:Cellosaurus (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | cellosaurus |
| rdfs:label | Cellosaurus |
| rdfs:subClassOf | tio:CellLine |
| rdfs:subClassOf | tio:Dataset |
| tio:Chebi (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | chebi |
| rdfs:label | ChEBI compound |
| rdfs:subClassOf | tio:Compound |
| rdfs:subClassOf | tio:Dataset |
| tio:ChemblCompound (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | chembl_compound |
| rdfs:label | ChEMBL compound |
| rdfs:subClassOf | tio:Compound |
| rdfs:subClassOf | tio:Dataset |
| tio:ChemblTarget (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | chembl_target |
| rdfs:label | ChEMBL target |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Protein |
| tio:Classification (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Classification |
| rdfs:subClassOf | tio:Category |
| tio:Clinvar (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | clinvar |
| rdfs:label | ClinVar variant |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Variant |
| tio:Cog (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | cog |
| rdfs:label | COG |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Ortholog |
| tio:Compound (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Compound |
| rdfs:subClassOf | tio:Category |
| rdfs:subClassOf | tio:Molecule |
| tio:Dataset (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Dataset |
| tio:Dbsnp (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | dbsnp |
| rdfs:label | dbSNP |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Variant |
| tio:Doid (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | doid |
| rdfs:label | Disease ontology |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:Domain (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Domain |
| rdfs:subClassOf | tio:Category |
| tio:Drug (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Drug |
| rdfs:subClassOf | tio:Category |
| tio:Drugbank (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | drugbank |
| rdfs:label | DrugBank |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Drug |
| tio:Ec (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | ec |
| rdfs:label | Enzyme nomenclature |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Function |
| tio:EnsemblGene (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | ensembl_gene |
| rdfs:label | Ensembl gene |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:EnsemblProtein (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | ensembl_protein |
| rdfs:label | Ensembl protein |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Protein |
| tio:EnsemblTranscript (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | ensembl_transcript |
| rdfs:label | Ensembl transcript |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Transcript |
| tio:Experiment (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Experiment |
| rdfs:subClassOf | tio:Category |
| tio:FlybaseGene (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | flybase_gene |
| rdfs:label | FlyBase gene |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:Function (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Function |
| rdfs:subClassOf | tio:Category |
| tio:Gea (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | gea |
| rdfs:label | GEA |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Experiment |
| tio:Gene (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Gene |
| rdfs:subClassOf | tio:Category |
| rdfs:subClassOf | tio:Sequence |
| tio:Genome (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Genome |
| rdfs:subClassOf | tio:Category |
| tio:Glycan (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Glycan |
| rdfs:subClassOf | tio:Category |
| rdfs:subClassOf | tio:Molecule |
| tio:Glytoucan (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | glytoucan |
| rdfs:label | GlyTouCan |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Glycan |
| tio:Go (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | go |
| rdfs:label | Gene ontology |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Function |
| tio:Hgnc (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | hgnc |
| rdfs:label | HGNC |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:HgncSymbol (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | hgnc_symbol |
| rdfs:label | HGNC gene symbol |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| rdfs:subClassOf | tio:Synonym |
| tio:Hmdb (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | hmdb |
| rdfs:label | HMDB |
| rdfs:subClassOf | tio:Compound |
| rdfs:subClassOf | tio:Dataset |
| tio:Homologene (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | homologene |
| rdfs:label | HomoloGene |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Ortholog |
| tio:Hp (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | hp |
| rdfs:label | Human Phenotype Ontology |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:HpInheritance (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | hp_inheritance |
| rdfs:label | HP Inheritance |
| rdfs:subClassOf | tio:Classification |
| rdfs:subClassOf | tio:Dataset |
| tio:HpPhenotype (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | hp_phenotype |
| rdfs:label | HP Phenotype |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:InchiKey (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | inchi_key |
| rdfs:label | InChIKey |
| rdfs:subClassOf | tio:Compound |
| rdfs:subClassOf | tio:Dataset |
| tio:Insdc (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | insdc |
| rdfs:label | GenBank/ENA/DDBJ |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:InsdcMaster (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | insdc_master |
| rdfs:label | INSDC master |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Project |
| tio:Intact (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | intact |
| rdfs:label | IntAct |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Interaction |
| tio:Interaction (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Interaction |
| rdfs:subClassOf | tio:Category |
| tio:Interpro (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | interpro |
| rdfs:label | InterPro |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Domain |
| tio:JgaDataset (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | jga_dataset |
| rdfs:label | JGA dataset |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Project |
| tio:JgaStudy (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | jga_study |
| rdfs:label | JGA study |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Project |
| tio:Lipid (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Lipid |
| rdfs:subClassOf | tio:Category |
| rdfs:subClassOf | tio:Molecule |
| tio:Lipidmaps (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | lipidmaps |
| rdfs:label | LIPID MAPS |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Lipid |
| tio:Literature (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Literature |
| rdfs:subClassOf | tio:Category |
| tio:Lrg (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | lrg |
| rdfs:label | LRG |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:MbgdGene (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | mbgd_gene |
| rdfs:label | MBGD gene |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:MbgdOrganism (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | mbgd_organism |
| rdfs:label | MBGD organism |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Organism |
| tio:Meddra (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | meddra |
| rdfs:label | MedDRA |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:Medgen (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | medgen |
| rdfs:label | MedGen |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:Mesh (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | mesh |
| rdfs:label | MeSH |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:Metabobank (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | metabobank |
| rdfs:label | MetaboBank |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Submission |
| tio:Mgi (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | mgi |
| rdfs:label | MGI |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:Mirbase (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | mirbase |
| rdfs:label | miRBase |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Transcript |
| tio:Molecule (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Molecule |
| rdfs:subClassOf | tio:Category |
| tio:Mondo (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | mondo |
| rdfs:label | MONDO |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:Nando (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | nando |
| rdfs:label | NANDO |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:NbdcHumandb (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | nbdc_humandb |
| rdfs:label | NBDC Human Database |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Project |
| tio:Ncbigene (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | ncbigene |
| rdfs:label | NCBI gene |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:NcitDisease (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | ncit_disease |
| rdfs:label | NCIt disease |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:NcitTissue (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | ncit_tissue |
| rdfs:label | NCIt tissue |
| rdfs:subClassOf | tio:Anatomy |
| rdfs:subClassOf | tio:Dataset |
| tio:OmaGroup (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | oma_group |
| rdfs:label | OMA group |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Ortholog |
| tio:OmaProtein (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | oma_protein |
| rdfs:label | OMA protein |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Protein |
| tio:OmimGene (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | omim_gene |
| rdfs:label | OMIM gene |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:OmimPhenotype (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | omim_phenotype |
| rdfs:label | OMIM phenotype |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:Organism (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Organism |
| rdfs:subClassOf | tio:Category |
| tio:Orphanet (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | orphanet |
| rdfs:label | Orphanet |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Phenotype |
| tio:Ortholog (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Ortholog |
| rdfs:subClassOf | tio:Category |
| tio:Pathbank (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | pathbank |
| rdfs:label | Pathbank |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Pathway |
| tio:Pathway (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Pathway |
| rdfs:subClassOf | tio:Category |
| tio:Pdb (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | pdb |
| rdfs:label | PDB |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Structure |
| tio:PdbCcd (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | pdb_ccd |
| rdfs:label | PDB CCD |
| rdfs:subClassOf | tio:Compound |
| rdfs:subClassOf | tio:Dataset |
| tio:Pfam (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | pfam |
| rdfs:label | Pfam |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Domain |
| tio:Phenotype (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Phenotype |
| rdfs:subClassOf | tio:Category |
| tio:Probe (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Probe |
| rdfs:subClassOf | tio:Category |
| tio:Project (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Project |
| rdfs:subClassOf | tio:Category |
| tio:Protein (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Protein |
| rdfs:subClassOf | tio:Category |
| rdfs:subClassOf | tio:Molecule |
| rdfs:subClassOf | tio:Sequence |
| tio:Proteome (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Proteome |
| rdfs:subClassOf | tio:Category |
| tio:PubchemCompound (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | pubchem_compound |
| rdfs:label | PubChem compound |
| rdfs:subClassOf | tio:Compound |
| rdfs:subClassOf | tio:Dataset |
| tio:PubchemPathway (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | pubchem_pathway |
| rdfs:label | PubChem pathway |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Pathway |
| tio:PubchemSubstance (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | pubchem_substance |
| rdfs:label | PubChem substance |
| rdfs:subClassOf | tio:Compound |
| rdfs:subClassOf | tio:Dataset |
| tio:Pubmed (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | pubmed |
| rdfs:label | PubMed |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Literature |
| tio:Reaction (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Reaction |
| rdfs:subClassOf | tio:Category |
| tio:ReactomePathway (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | reactome_pathway |
| rdfs:label | Reactome pathway |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Pathway |
| tio:ReactomeReaction (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | reactome_reaction |
| rdfs:label | Reactome reaction |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Reaction |
| tio:RefseqGenomic (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | refseq_genomic |
| rdfs:label | RefSeq genomic |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:RefseqProtein (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | refseq_protein |
| rdfs:label | RefSeq protein |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Protein |
| tio:RefseqRna (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | refseq_rna |
| rdfs:label | RefSeq RNA |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Transcript |
| tio:Rgd (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | rgd |
| rdfs:label | RGD |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:Rhea (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | rhea |
| rdfs:label | Rhea |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Reaction |
| tio:Sample (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Sample |
| rdfs:subClassOf | tio:Category |
| tio:Sequence (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Sequence |
| rdfs:subClassOf | tio:Category |
| tio:SequenceRun (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Sequence run |
| rdfs:subClassOf | tio:Category |
| tio:Sgd (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | sgd |
| rdfs:label | SGD |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:SraAccession (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | sra_accession |
| rdfs:label | SRA accession |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Submission |
| tio:SraAnalysis (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | sra_analysis |
| rdfs:label | SRA analysis |
| rdfs:subClassOf | tio:Analysis |
| rdfs:subClassOf | tio:Dataset |
| tio:SraExperiment (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | sra_experiment |
| rdfs:label | SRA experiment |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Experiment |
| tio:SraProject (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | sra_project |
| rdfs:label | SRA project |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Project |
| tio:SraRun (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | sra_run |
| rdfs:label | SRA run |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:SequenceRun |
| tio:SraSample (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | sra_sample |
| rdfs:label | SRA sample |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Sample |
| tio:Structure (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Structure |
| rdfs:subClassOf | tio:Category |
| tio:Submission (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Submission |
| rdfs:subClassOf | tio:Category |
| tio:Swisslipids (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | swisslipids |
| rdfs:label | SwissLipids |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Lipid |
| tio:Synonym (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Synonym |
| rdfs:subClassOf | tio:Category |
| tio:Tair (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | tair |
| rdfs:label | TAIR |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:Taxonomy (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | taxonomy |
| rdfs:label | Taxonomy |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Organism |
| tio:Togovar (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | togovar |
| rdfs:label | TogoVar variant |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Variant |
| tio:Transcript (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Transcript |
| rdfs:subClassOf | tio:Category |
| rdfs:subClassOf | tio:Sequence |
| tio:Uniprot (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | uniprot |
| rdfs:label | UniProt |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Protein |
| tio:UniprotMnemonic (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | uniprot_mnemonic |
| rdfs:label | UniProt mnemonic |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Protein |
| rdfs:subClassOf | tio:Synonym |
| tio:UniprotReferenceProteome (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | uniprot_reference_proteome |
| rdfs:label | UniProt reference proteome |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Proteome |
| tio:Variant (rdf:type owl:Class ) | |
|---|---|
| rdfs:label | Variant |
| rdfs:subClassOf | tio:Category |
| tio:Vgnc (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | vgnc |
| rdfs:label | VGNC |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:Wikipathways (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | wikipathways |
| rdfs:label | WikiPathways |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Pathway |
| tio:WormbaseGene (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | wormbase_gene |
| rdfs:label | WormBase gene |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:XenbaseGene (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | xenbase_gene |
| rdfs:label | Xenbase gene |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
| tio:ZfinGene (rdf:type owl:Class ) | |
|---|---|
| dcterms:identifier | zfin_gene |
| rdfs:label | ZFIN gene |
| rdfs:subClassOf | tio:Dataset |
| rdfs:subClassOf | tio:Gene |
Properties
Object properties
| tio:relation (rdf:type owl:ObjectProperty ) | |
|---|---|
| rdfs:comment | Identifiers of the domain dataset have a biological relation with that of the range dataset. |
Datatype properties
| tio:display_label (rdf:type owl:DatatypeProperty ) | |
|---|---|
| rdfs:comment | A label to be displayed on the TogoID web UI. |
Sub properties
| tio:TIO_000001 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is nearly equivalent to |
| rdfs:domain | tio:Category |
| rdfs:label | is nearly equivalent to |
| rdfs:range | tio:Category |
| rdfs:subPropertyOf | tio:relation |
| tio:TIO_000002 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is equivalent to |
| rdfs:domain | tio:Category |
| rdfs:label | is equivalent to |
| rdfs:range | tio:Category |
| rdfs:subPropertyOf | tio:relation |
| tio:TIO_000003 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has corresponding variant |
| rdfs:domain | tio:Variant |
| rdfs:label | variant has corresponding variant |
| rdfs:range | tio:Variant |
| rdfs:subPropertyOf | tio:relation |
| tio:TIO_000004 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has GO annotation |
| rdfs:domain | tio:Category |
| rdfs:label | has GO annotation |
| rdfs:range | tio:Go |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000007 |
| tio:TIO_000005 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has GO biological process |
| rdfs:domain | tio:Category |
| rdfs:label | has GO biological process |
| rdfs:range | tio:Go |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000008 |
| tio:TIO_000006 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has GO cellular component |
| rdfs:domain | tio:Category |
| rdfs:label | has GO cellular component |
| rdfs:range | tio:Go |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000009 |
| tio:TIO_000007 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is GO annotation of |
| rdfs:domain | tio:Go |
| rdfs:label | is GO annotation of |
| rdfs:range | tio:Category |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000004 |
| tio:TIO_000008 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is GO biological process of |
| rdfs:domain | tio:Go |
| rdfs:label | is GO biological process of |
| rdfs:range | tio:Category |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000005 |
| tio:TIO_000009 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is GO cellular component of |
| rdfs:domain | tio:Go |
| rdfs:label | is GO cellular component of |
| rdfs:range | tio:Category |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000006 |
| tio:TIO_000010 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has related phenotype |
| rdfs:domain | tio:Category |
| rdfs:label | has related phenotype |
| rdfs:range | tio:Phenotype |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000011 |
| tio:TIO_000011 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is related with |
| rdfs:domain | tio:Phenotype |
| rdfs:label | phenotype is related with |
| rdfs:range | tio:Category |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000010 |
| tio:TIO_000012 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | interacts with |
| rdfs:domain | tio:Molecule |
| rdfs:label | molecule interacts with molecule |
| rdfs:range | tio:Molecule |
| rdfs:subPropertyOf | tio:relation |
| tio:TIO_000013 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has protein domain |
| rdfs:domain | tio:Protein |
| rdfs:label | protein has protein domain |
| rdfs:range | tio:Domain |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000015 |
| tio:TIO_000014 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has protein domain |
| rdfs:domain | tio:Structure |
| rdfs:label | structure has protein domain |
| rdfs:range | tio:Domain |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000016 |
| tio:TIO_000015 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is in protein |
| rdfs:domain | tio:Domain |
| rdfs:label | protein domain is in protein |
| rdfs:range | tio:Protein |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000013 |
| tio:TIO_000016 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is in structure |
| rdfs:domain | tio:Domain |
| rdfs:label | protein domain is in structure |
| rdfs:range | tio:Structure |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000014 |
| tio:TIO_000017 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is orthologous to |
| rdfs:domain | tio:Sequence |
| rdfs:label | sequence is orthologous to sequence |
| rdfs:range | tio:Sequence |
| rdfs:subPropertyOf | tio:relation |
| tio:TIO_000018 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has orthologous group member |
| rdfs:domain | tio:Ortholog |
| rdfs:label | orthologous group has member sequence |
| rdfs:range | tio:Sequence |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000019 |
| tio:TIO_000019 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is member of orthologous group |
| rdfs:domain | tio:Sequence |
| rdfs:label | sequence is member of orthologous group |
| rdfs:range | tio:Ortholog |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000018 |
| tio:TIO_000020 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is represented as |
| rdfs:domain | tio:Compound |
| rdfs:label | compound is represented as InChIKey |
| rdfs:range | tio:InchiKey |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000021 |
| tio:TIO_000021 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | represents |
| rdfs:domain | tio:InchiKey |
| rdfs:label | InChIKey represents compound |
| rdfs:range | tio:Compound |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000020 |
| tio:TIO_000022 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has synonym |
| rdfs:domain | tio:Category |
| rdfs:label | has synonym |
| rdfs:range | tio:Synonym |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000023 |
| tio:TIO_000023 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is synonym of |
| rdfs:domain | tio:Synonym |
| rdfs:label | is synonym of |
| rdfs:range | tio:Category |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000022 |
| tio:TIO_000024 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is product of gene |
| rdfs:domain | tio:Protein |
| rdfs:label | protein is product of gene |
| rdfs:range | tio:Gene |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000025 |
| tio:TIO_000025 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has gene product |
| rdfs:domain | tio:Gene |
| rdfs:label | gene has protein as product |
| rdfs:range | tio:Protein |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000024 |
| tio:TIO_000026 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has 3D structure |
| rdfs:domain | tio:Protein |
| rdfs:label | protein has 3D structure |
| rdfs:range | tio:Structure |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000027 |
| tio:TIO_000027 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is 3D structure of |
| rdfs:domain | tio:Structure |
| rdfs:label | is 3D structure of protein |
| rdfs:range | tio:Protein |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000026 |
| tio:TIO_000028 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has EC number |
| rdfs:domain | tio:Sequence |
| rdfs:label | sequence has EC number |
| rdfs:range | tio:Ec |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000029 |
| tio:TIO_000029 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is EC number of |
| rdfs:domain | tio:Ec |
| rdfs:label | is EC number of sequence |
| rdfs:range | tio:Sequence |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000028 |
| tio:TIO_000030 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is target of |
| rdfs:domain | tio:Gene |
| rdfs:domain | tio:Transcript |
| rdfs:label | gene or transcript is target of probe |
| rdfs:range | tio:Probe |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000031 |
| tio:TIO_000031 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | detects |
| rdfs:domain | tio:Probe |
| rdfs:label | probe detects gene or transcript |
| rdfs:range | tio:Gene |
| rdfs:range | tio:Transcript |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000030 |
| tio:TIO_000032 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has reference |
| rdfs:domain | tio:Category |
| rdfs:label | has reference |
| rdfs:range | tio:Literature |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000033 |
| tio:TIO_000033 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is reference of |
| rdfs:domain | tio:Literature |
| rdfs:label | is reference of |
| rdfs:range | tio:Category |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000032 |
| tio:TIO_000034 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is transcribed from |
| rdfs:domain | tio:Transcript |
| rdfs:label | transcript is transcribed from gene |
| rdfs:range | tio:Gene |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000035 |
| tio:TIO_000035 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is transcribed to |
| rdfs:domain | tio:Gene |
| rdfs:label | gene is transcribed to transcript |
| rdfs:range | tio:Transcript |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000034 |
| tio:TIO_000036 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is translated to |
| rdfs:domain | tio:Transcript |
| rdfs:label | transcript is translated to protein |
| rdfs:range | tio:Protein |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000037 |
| tio:TIO_000037 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is tranlated from |
| rdfs:domain | tio:Protein |
| rdfs:label | protein is translated from transcript |
| rdfs:range | tio:Transcript |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000036 |
| tio:TIO_000038 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | includes analysis |
| rdfs:domain | tio:Submission |
| rdfs:label | submission includes analysis |
| rdfs:range | tio:Analysis |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000048 |
| tio:TIO_000039 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | includes experiment |
| rdfs:domain | tio:Submission |
| rdfs:label | submission includes experiment |
| rdfs:range | tio:Experiment |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000049 |
| tio:TIO_000040 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | performs experiment |
| rdfs:domain | tio:Project |
| rdfs:label | project performs experiment |
| rdfs:range | tio:Experiment |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000050 |
| tio:TIO_000041 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | includes project |
| rdfs:domain | tio:Submission |
| rdfs:label | submission includes project |
| rdfs:range | tio:Project |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000051 |
| tio:TIO_000042 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | includes sample |
| rdfs:domain | tio:Submission |
| rdfs:label | submission includes sample |
| rdfs:range | tio:Sample |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000052 |
| tio:TIO_000043 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | captures sample |
| rdfs:domain | tio:Experiment |
| rdfs:label | experiment captures sample |
| rdfs:range | tio:Sample |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000053 |
| tio:TIO_000044 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is produced from sample |
| rdfs:domain | tio:SequenceRun |
| rdfs:label | sequence run is produced from sample |
| rdfs:range | tio:Sample |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000054 |
| tio:TIO_000045 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | includes sequence run |
| rdfs:domain | tio:Submission |
| rdfs:label | submission includes sequence run |
| rdfs:range | tio:SequenceRun |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000055 |
| tio:TIO_000046 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | produces sequence run |
| rdfs:domain | tio:Project |
| rdfs:label | project produces sequence run |
| rdfs:range | tio:SequenceRun |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000056 |
| tio:TIO_000047 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | produces sequence run |
| rdfs:domain | tio:Experiment |
| rdfs:label | experiment produces sequence run |
| rdfs:range | tio:SequenceRun |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000057 |
| tio:TIO_000048 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | belongs to submission |
| rdfs:domain | tio:Analysis |
| rdfs:label | analysis belongs to submission |
| rdfs:range | tio:Submission |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000038 |
| tio:TIO_000049 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | belongs to submission |
| rdfs:domain | tio:Experiment |
| rdfs:label | experiment belongs to submission |
| rdfs:range | tio:Submission |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000039 |
| tio:TIO_000050 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | belongs to project |
| rdfs:domain | tio:Experiment |
| rdfs:label | experiment belongs to project |
| rdfs:range | tio:Project |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000040 |
| tio:TIO_000051 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | belongs to submission |
| rdfs:domain | tio:Project |
| rdfs:label | project belongs to submission |
| rdfs:range | tio:Submission |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000041 |
| tio:TIO_000052 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | belongs to submission |
| rdfs:domain | tio:Sample |
| rdfs:label | sample belongs to submission |
| rdfs:range | tio:Submission |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000042 |
| tio:TIO_000053 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is captured to perform experiment |
| rdfs:domain | tio:Sample |
| rdfs:label | sample is captured to perform experiment |
| rdfs:range | tio:Experiment |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000043 |
| tio:TIO_000054 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is captured to produce sequence run |
| rdfs:domain | tio:Sample |
| rdfs:label | sample is captured to produce sequence run |
| rdfs:range | tio:SequenceRun |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000044 |
| tio:TIO_000055 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | belongs to submission |
| rdfs:domain | tio:SequenceRun |
| rdfs:label | sequence run belongs to submission |
| rdfs:range | tio:Submission |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000045 |
| tio:TIO_000056 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | belongs to project |
| rdfs:domain | tio:SequenceRun |
| rdfs:label | sequence run belongs to project |
| rdfs:range | tio:Project |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000046 |
| tio:TIO_000057 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is produced in experiment |
| rdfs:domain | tio:SequenceRun |
| rdfs:label | sequence run is produced in experiment |
| rdfs:range | tio:Experiment |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000047 |
| tio:TIO_000058 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has clinical significance |
| rdfs:domain | tio:Variant |
| rdfs:label | variant has clinical significance |
| rdfs:range | tio:Variant |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000059 |
| tio:TIO_000059 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is clinical significance of |
| rdfs:domain | tio:Variant |
| rdfs:label | is clinical significance of |
| rdfs:range | tio:Variant |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000058 |
| tio:TIO_000060 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is attached to |
| rdfs:domain | tio:Glycan |
| rdfs:label | glycan is attached to protein |
| rdfs:range | tio:Protein |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000061 |
| tio:TIO_000061 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is modified with |
| rdfs:domain | tio:Protein |
| rdfs:label | protein is modified with glycan |
| rdfs:range | tio:Glycan |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000060 |
| tio:TIO_000062 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is located in |
| rdfs:domain | tio:Variant |
| rdfs:label | variant is located in sequence |
| rdfs:range | tio:Sequence |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000063 |
| tio:TIO_000063 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has variant |
| rdfs:domain | tio:Sequence |
| rdfs:label | sequence has variant |
| rdfs:range | tio:Variant |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000062 |
| tio:TIO_000064 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is gene of organism |
| rdfs:domain | tio:Gene |
| rdfs:label | is gene of organism |
| rdfs:range | tio:Organism |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000065 |
| tio:TIO_000065 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has gene |
| rdfs:domain | tio:Organism |
| rdfs:label | organism has gene |
| rdfs:range | tio:Gene |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000064 |
| tio:TIO_000066 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | targets to |
| rdfs:domain | tio:Compound |
| rdfs:label | compound targets to phenotype |
| rdfs:range | tio:Phenotype |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000067 |
| tio:TIO_000067 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is targeted by |
| rdfs:domain | tio:Phenotype |
| rdfs:label | phenotype is targeted by compound |
| rdfs:range | tio:Compound |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000066 |
| tio:TIO_000068 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has participant molecule |
| rdfs:domain | tio:Pathway |
| rdfs:label | pathway has participant molecule |
| rdfs:range | tio:Molecule |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000069 |
| tio:TIO_000069 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | participates in pathway |
| rdfs:domain | tio:Molecule |
| rdfs:label | molecule participates in pathway |
| rdfs:range | tio:Pathway |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000068 |
| tio:TIO_000070 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has participant reaction |
| rdfs:domain | tio:Pathway |
| rdfs:label | pathway has participant reaction |
| rdfs:range | tio:Reaction |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000071 |
| tio:TIO_000071 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | participates in pathway |
| rdfs:domain | tio:Reaction |
| rdfs:label | reaction participates in pathway |
| rdfs:range | tio:Pathway |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000070 |
| tio:TIO_000072 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has protein domain in pathway |
| rdfs:domain | tio:Pathway |
| rdfs:label | pathway has protein domain |
| rdfs:range | tio:Domain |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000073 |
| tio:TIO_000073 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | participates in pathway |
| rdfs:domain | tio:Domain |
| rdfs:label | protein domain participates in pathway |
| rdfs:range | tio:Pathway |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000072 |
| tio:TIO_000074 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | participates in interaction |
| rdfs:domain | tio:Molecule |
| rdfs:label | molecule participates in interaction |
| rdfs:range | tio:Interaction |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000075 |
| tio:TIO_000075 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has participant molecule |
| rdfs:domain | tio:Interaction |
| rdfs:label | interaction has participant molecule |
| rdfs:range | tio:Molecule |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000074 |
| tio:TIO_000076 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | participates in reaction |
| rdfs:domain | tio:Molecule |
| rdfs:label | molecule participates in reaction |
| rdfs:range | tio:Reaction |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000077 |
| tio:TIO_000077 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has participant molecule |
| rdfs:domain | tio:Reaction |
| rdfs:label | reaction has participant molecule |
| rdfs:range | tio:Molecule |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000076 |
| tio:TIO_000078 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is sequenced in |
| rdfs:domain | tio:Genome |
| rdfs:label | genome is sequenced in project |
| rdfs:range | tio:Project |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000079 |
| tio:TIO_000079 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | determines genome sequence |
| rdfs:domain | tio:Project |
| rdfs:label | project determines genome sequence |
| rdfs:range | tio:Genome |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000078 |
| tio:TIO_000080 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is sequenced with |
| rdfs:domain | tio:Genome |
| rdfs:label | genome is sequenced with sample |
| rdfs:range | tio:Sample |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000081 |
| tio:TIO_000081 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is used to sequence |
| rdfs:domain | tio:Sample |
| rdfs:label | sample is used to sequence genome |
| rdfs:range | tio:Genome |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000080 |
| tio:TIO_000082 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is model of |
| rdfs:domain | tio:CellLine |
| rdfs:label | cell line is model of phenotype |
| rdfs:range | tio:Phenotype |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000083 |
| tio:TIO_000083 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is observed in |
| rdfs:domain | tio:Phenotype |
| rdfs:label | phenotype is observed in cell line |
| rdfs:range | tio:CellLine |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000082 |
| tio:TIO_000084 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has participant gene |
| rdfs:domain | tio:Pathway |
| rdfs:label | pathway has participant gene |
| rdfs:range | tio:Gene |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000085 |
| tio:TIO_000085 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | participates in pathway |
| rdfs:domain | tio:Gene |
| rdfs:label | gene participates in pathway |
| rdfs:range | tio:Pathway |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000084 |
| tio:TIO_000086 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is observed in anatomic site |
| rdfs:domain | tio:Phenotype |
| rdfs:label | phenotype is observed in anatomic site |
| rdfs:range | tio:Anatomy |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000087 |
| tio:TIO_000087 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | can have phenotype |
| rdfs:domain | tio:Anatomy |
| rdfs:label | anatomic site can have phenotype |
| rdfs:range | tio:Phenotype |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000086 |
| tio:TIO_000088 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | classifies |
| rdfs:domain | tio:Drug |
| rdfs:label | drug classification classifies compound |
| rdfs:range | tio:Compound |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000089 |
| tio:TIO_000089 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is classified as |
| rdfs:domain | tio:Compound |
| rdfs:label | compound is classified as drug classification |
| rdfs:range | tio:Drug |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000088 |
| tio:TIO_000090 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is proteome of |
| rdfs:domain | tio:Proteome |
| rdfs:label | is proteome of organism |
| rdfs:range | tio:Organism |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000091 |
| tio:TIO_000091 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has proteome |
| rdfs:domain | tio:Organism |
| rdfs:label | organism has proteome |
| rdfs:range | tio:Proteome |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000090 |
| tio:TIO_000092 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is coded by |
| rdfs:domain | tio:Proteome |
| rdfs:label | proteome is coded by genome |
| rdfs:range | tio:Genome |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000093 |
| tio:TIO_000093 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | codes |
| rdfs:domain | tio:Genome |
| rdfs:label | genome codes proteome |
| rdfs:range | tio:Proteome |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000092 |
| tio:TIO_000094 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | analyzes |
| rdfs:domain | tio:Project |
| rdfs:label | project analyzes sample |
| rdfs:range | tio:Sample |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000095 |
| tio:TIO_000095 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is analyzed in |
| rdfs:domain | tio:Sample |
| rdfs:label | sample is analyzed in project |
| rdfs:range | tio:Project |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000094 |
| tio:TIO_000096 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has compound |
| rdfs:domain | tio:Structure |
| rdfs:label | 3D structure has compound |
| rdfs:range | tio:Compound |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000097 |
| tio:TIO_000097 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is component of |
| rdfs:domain | tio:Compound |
| rdfs:label | compound is component of 3D structure |
| rdfs:range | tio:Structure |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000096 |
| tio:TIO_000098 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | codes protein to process glycan |
| rdfs:domain | tio:Gene |
| rdfs:label | gene codes protein to process glycan |
| rdfs:range | tio:Glycan |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000099 |
| tio:TIO_000099 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is processed by protein coded by gene |
| rdfs:domain | tio:Glycan |
| rdfs:label | glycan is processed by protein coded by gene |
| rdfs:range | tio:Gene |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000098 |
| tio:TIO_000100 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has symptom |
| rdfs:domain | tio:Phenotype |
| rdfs:label | disease has symptom |
| rdfs:range | tio:Phenotype |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000101 |
| tio:TIO_000101 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is observed in disease |
| rdfs:domain | tio:Phenotype |
| rdfs:label | symptom is observed in disease |
| rdfs:range | tio:Phenotype |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000100 |
| tio:TIO_000102 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is related with symptom |
| rdfs:domain | tio:Gene |
| rdfs:label | gene is related with symptom |
| rdfs:range | tio:Symptom |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000103 |
| tio:TIO_000103 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is related with gene |
| rdfs:domain | tio:Symptom |
| rdfs:label | symptom is related with gene |
| rdfs:range | tio:Gene |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000102 |
| tio:TIO_000104 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has mode of inferitance |
| rdfs:domain | tio:Phenotype |
| rdfs:label | phenotype has mode of inheritance |
| rdfs:range | tio:Classification |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000105 |
| tio:TIO_000105 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is mode of inheritance of |
| rdfs:domain | tio:Classification |
| rdfs:label | is mode of inheritance of phenotype |
| rdfs:range | tio:Phenotype |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000104 |
| tio:TIO_000106 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has member |
| rdfs:domain | tio:Category |
| rdfs:label | has member |
| rdfs:range | tio:Category |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000107 |
| tio:TIO_000107 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is member of |
| rdfs:domain | tio:Category |
| rdfs:label | is member of |
| rdfs:range | tio:Category |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000106 |
| tio:TIO_000108 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is determined in project |
| rdfs:domain | tio:Sequence |
| rdfs:label | sequence is determined in project |
| rdfs:range | tio:Project |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000109 |
| tio:TIO_000109 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | determines sequence |
| rdfs:domain | tio:Project |
| rdfs:label | project determines sequence |
| rdfs:range | tio:Sequence |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000108 |
| tio:TIO_000110 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is determined using sample |
| rdfs:domain | tio:Sequence |
| rdfs:label | sequence is determined using sample |
| rdfs:range | tio:Sample |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000111 |
| tio:TIO_000111 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | is used to determine sequence |
| rdfs:domain | tio:Sample |
| rdfs:label | sample is used to determine sequence |
| rdfs:range | tio:Sequence |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000110 |
| tio:TIO_000112 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | codes protein participating in |
| rdfs:domain | tio:Gene |
| rdfs:label | gene codes protein participating in pathway |
| rdfs:range | tio:Pathway |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000113 |
| tio:TIO_000113 (rdf:type rdf:Description ) | |
|---|---|
| tio:display_label | has component coded by |
| rdfs:domain | tio:Pathway |
| rdfs:label | pathway has component coded by gene |
| rdfs:range | tio:Gene |
| rdfs:subPropertyOf | tio:relation |
| owl:inverseOf | tio:TIO_000112 |